FastQCFastQC Report
Tue 7 May 2024
EGAF00007823185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1340
Total Bases202.3 kbp
Sequences flagged as poor quality0
Sequence length151
%GC77

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC654.850746268656716No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC372.7611940298507465No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG120.8955223880597015No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.6716417910447761No Hit
ATTGCGCAATGCCAAACCAGGGGCCTCTTTCGAGTCTTGGCTCCAAGATG50.3731343283582089No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.3731343283582089No Hit
GGCTGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2985074626865672No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC40.2985074626865672No Hit
ATTGCGCAATGATTCGACCGGGATGCACATTTGTGCGTGGTAGCGGAGCG40.2985074626865672No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2985074626865672No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
ATTGCGAAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.22388059701492538No Hit
GCGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.22388059701492538No Hit
GGCTGTGGGGTGGGGGGGTCTCCGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
GGGGGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22388059701492538No Hit
GCGTGCGGGCTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGCTGGGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GCGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GCCTTCGGGGTGGGGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGGGGAGGGCGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GCGTGCGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
ATTGCGCAATGACGCCCCAGGTACCACATTGCGCAATCTGTCTCTTATAC20.1492537313432836No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA20.1492537313432836No Hit
GGGGGTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1492537313432836No Hit
GCGTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGCTGGGGGGTGGGGGGGTCTCCGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
ATTGCGCAATGGAACCGACGGGGGAAAAAAAAAAAGTGAAAATGAATCAG20.1492537313432836No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GCGGGCGGGCTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GCGCTGGGGCCGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit
GGGGTGTGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1492537313432836No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)