FastQCFastQC Report
Tue 7 May 2024
EGAF00007823187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1036
Total Bases156.4 kbp
Sequences flagged as poor quality0
Sequence length151
%GC80

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC555.308880308880308No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC131.2548262548262548No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG80.7722007722007722No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.7722007722007722No Hit
ATTGCGCAATGTACGTACCGGGGTGGCAATAGGGAATAAAGTGGAAGAAC60.5791505791505791No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3861003861003861No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3861003861003861No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3861003861003861No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3861003861003861No Hit
GGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3861003861003861No Hit
GGTGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.28957528957528955No Hit
GCGTGCGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.28957528957528955No Hit
GGCGGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.28957528957528955No Hit
ATTGCGCAATCTGTCTCTTATACACCAGTCTCTTATACACATCTCCGAGC30.28957528957528955No Hit
GGGCGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.28957528957528955No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.28957528957528955No Hit
GGCGGTGGGGTGGGGGGGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GCGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GGGTGGTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
ATTGCGCAATCTCAGGGTGGGGGCCTTTCAAAAAGAAAAAAAAAAAAAAA20.19305019305019305No Hit
GGGGGGTGGCAGGGGGGGGTAAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTAATACACATCTCCGAGCCC20.19305019305019305No Hit
GGGGGCTGGGGGGGGGGGGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCGAGCC20.19305019305019305No Hit
GCCCGCGGGCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC20.19305019305019305No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GGGGGAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
AGTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.19305019305019305No Hit
GGGTTTTGGCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GGGGGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.19305019305019305No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)