FastQCFastQC Report
Tue 7 May 2024
EGAF00007823189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2733
Total Bases412.6 kbp
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1224.463959019392609No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC521.9026710574460302No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA130.47566776436150754No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG120.43907793633369924No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.2561287961946579No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA70.2561287961946579No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC60.21953896816684962No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG60.21953896816684962No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG50.18294914013904134No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT50.18294914013904134No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC40.14635931211123307No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10976948408342481No Hit
ATTGCGCAATCTGTCACTTATACACCTGTCTCTTATACACATCTCCGAGC30.10976948408342481No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACAAGACTTGTCTGCAAATCG30.10976948408342481No Hit
GGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10976948408342481No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT30.10976948408342481No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10976948408342481No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA30.10976948408342481No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT30.10976948408342481No Hit
GGGGGGTGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10976948408342481No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTT30.10976948408342481No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)