FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1171
Sequences flagged as poor quality0
Sequence length151
%GC72

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1159.82066609735269No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC383.2450896669513236No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG121.0247651579846286No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.6831767719897524No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.5123825789923143No Hit
ATTGCGCAATGAACTAGACGGGGCAATAGATCGGGATGACTTGTGGCTAG50.4269854824935952No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACAAGACTAGATCTCTCATCT40.3415883859948762No Hit
ATTGCGCAATGTCGCCCAGGGGACAGCAAGGGGACTTAAACAACCCTAGC30.25619128949615716No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.25619128949615716No Hit
ATTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.25619128949615716No Hit
GGGCGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
GGGGTGTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACAAGACTAGATCTCTCATCG20.1707941929974381No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGATCTCTCATCG20.1707941929974381No Hit
GGTGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
AATGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACAACTCCGAGC20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTGATACACATCTCCGAGC20.1707941929974381No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC20.1707941929974381No Hit
GGGGTGTGGGTGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.1707941929974381No Hit
GGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
GCCCGGGGGCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATTGCGCAATGTCTCGCGTGGGGGCCTCGGTTTCGGACCGCCGGGCGAAG20.1707941929974381No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC20.1707941929974381No Hit
GGGGGGTGGCGGGGGGGGGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACCTGTATCTTATACACATCTCCGAGCCC20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCACTTATACACATCTCCGAGC20.1707941929974381No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCGCTTATACACATCTCCGAGCCC20.1707941929974381No Hit
GGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1707941929974381No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)