FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4339
Sequences flagged as poor quality0
Sequence length151
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4089.403088269186448No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1784.102327725282323No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG430.9910117538603365No Hit
ATTGCGCAATGATTGCCAGGGGAACCAAGTCACTCATGGATGAGGTGGTG180.41484212952293154No Hit
ATTGCGCAATGGAGAGCCGGGGGCGGTGGCTCACGCCTGTAATCCCAGCT160.36874855957593916No Hit
ATTGCGCAATGGACTTGACGGGCGCGATAAGGGCGTTTGGTGGATGCCTT160.36874855957593916No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130.29960820465545057No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG110.2535146347084582No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.20742106476146577No Hit
ATTGCGCAATGTTCTCCAGGGGGTACTCGTGCATGACCGATAGTGAACCA90.20742106476146577No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC80.18437427978796958No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG80.18437427978796958No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.13828070984097718No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.11523392486748099No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.11523392486748099No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.11523392486748099No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC50.11523392486748099No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.11523392486748099No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)