FastQCFastQC Report
Tue 7 May 2024
EGAF00007823210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54234
Total Bases8.1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACAGAAGCACAGTGTA5280.9735590220157097No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACAGAAGCACA1290.23785817015156543No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAC990.18254231662794557No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT700.12907032488844636No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT610.11247556883136041No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)