FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18340
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCG7734.214830970556161No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCT5853.189749182115594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4052.208287895310796No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2031.1068702290076335No Hit
ATTGCGCAATGCACAGGGAGGGGTTTACGCCCTACCGAGCGCGGCCAACG1881.0250817884405672No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1610.8778625954198473No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1180.64340239912759No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTA1040.5670665212649946No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC910.4961832061068702No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC840.45801526717557256No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATAT790.430752453653217No Hit
ATTGCGCAATGCTTACGGGGGGATGACAAAAAAGGGTCGATACAGAATGG770.41984732824427484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT720.39258451472191935No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT710.3871319520174482No Hit
ATTGCGCAATGGATACTCGGGGGCAGCGCCACCAGCAATGAGGGCATCCA700.38167938931297707No Hit
ATTGCGCAATGAGTACAAAGGGGGGGATGACGTCAAGTCCTCATGGCCCT700.38167938931297707No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC680.3707742639040349No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT620.33805888767720826No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC450.24536532170119957No Hit
ATTGCGCAATGTCGCTTCTGGGGGATGACAAAAAAGGGTCGATACAGAAT420.22900763358778628No Hit
ATTGCGCAATGATACAGTGGGGGTAGAACTTAAAAAAGATGTTCCAATAC390.21264994547437296No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT390.21264994547437296No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCG380.20719738276990188No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC360.19629225736095968No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA340.18538713195201745No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG330.17993456924754633No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG310.16902944383860413No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG290.15812431842966193No Hit
ATTGCGCAATGCCTTCTGGGGGATGACAAAAAAGGGTCGATACAGAATGG290.15812431842966193No Hit
ATTGCGCAATGTCCCAGCAGGGGGGACTGTGTGAGTGCTTGACTGATGTT280.15267175572519084No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA260.14176663031624864No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC260.14176663031624864No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG250.13631406761177753No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATAGCG250.13631406761177753No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT250.13631406761177753No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCGCG240.13086150490730644No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC240.13086150490730644No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT230.12540894220283533No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG230.12540894220283533No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT230.12540894220283533No Hit
ATTGCGCAATGTATGAACCGGGCAACTCGAGTGCATGAAGCTGGAATCGC220.11995637949836424No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA220.11995637949836424No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC210.11450381679389314No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC210.11450381679389314No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCT210.11450381679389314No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCT210.11450381679389314No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA200.10905125408942204No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT200.10905125408942204No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATGG190.10359869138495094No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG190.10359869138495094No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)