FastQCFastQC Report
Tue 7 May 2024
EGAF00007823283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13545
Total Bases2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC56

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT5734.230343300110742No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG3922.8940568475452193No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2311.7054263565891472No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1861.3732004429678848No Hit
ATTGCGCAATGAATCCCGCGGGGGGGCGTGACATCGGCGCCCCCGGAATG1451.0705057216685123No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1310.9671465485418973No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG910.6718346253229974No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGA900.6644518272425249No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAAT840.6201550387596899No Hit
ATTGCGCAATGCATCAACTGGGGAAATAGATCCTGAAACCGCGTGCTTAC810.5980066445182725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC650.47988187523071246No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCT590.43558508674787744No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT580.4282022886674049No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT560.4134366925064599No Hit
ATTGCGCAATGGTCACGGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTG540.3986710963455149No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT520.3839055001845699No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCG480.35437430786268No Hit
ATTGCGCAATGGGTGGGCCGGGAGGCCTTCCGAGTGTTTGACAAGGATGG480.35437430786268No Hit
ATTGCGCAATGGCCGGGACGGGAGGCCTTCCGAGTGTTTGACAAGGATGG460.33960871170173496No Hit
ATTGCGCAATGTGATCCCCGGGGGGAGGACCATCTCCTAAGGCTAAATAC440.32484311554079No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT410.30269472129937247No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT370.2731635289774825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA360.26578073089701No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC300.22148394241417496No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT270.19933554817275745No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG260.19195275009228496No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC250.18456995201181248No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG240.17718715393134No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC230.16980435585086748No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG230.16980435585086748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC230.16980435585086748No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA220.162421557770395No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA220.162421557770395No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA200.14765596160944996No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAG190.14027316352897748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG190.14027316352897748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC190.14027316352897748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT180.132890365448505No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG170.12550756736803248No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG170.12550756736803248No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT160.11812476928755998No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT150.11074197120708748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC150.11074197120708748No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCTCG150.11074197120708748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT150.11074197120708748No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)