FastQCFastQC Report
Tue 7 May 2024
EGAF00007823297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6235
Total Bases941.4 kbp
Sequences flagged as poor quality0
Sequence length151
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3675.886126704089816No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1652.6463512429831595No Hit
ATTGCGCAATGACCGATGTGGGAGAAAGAAGGAAAAATCTTAAAGACACT590.946271050521251No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG430.6896551724137931No Hit
ATTGCGCAATGCGCTATATGGGATAGGGGTGAAAGGCTAAACAAACCTGG150.24057738572574178No Hit
ATTGCGCAATGAAGCAGAGGGGATAGGGAACGTGAGCTGGGTTTAGACCG110.1764234161988773No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACA90.14434643143544507No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCG90.14434643143544507No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCA90.14434643143544507No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.12830793905372895No Hit
ATTGCGCAATGAGATGGTCGGGGGAGAAGGAGTGCCGAAAGGCCGCAGAG70.11226944667201283No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)