FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823301

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823301
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9031
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT3814.218801904550991No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG2512.7793156903997343No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1912.1149374377145387No Hit
ATTGCGCAATGGGATGCGGGGAAGGTGATTGGTACAGCCATGATAAAAAC1441.594507806444469No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1221.350902447126564No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1001.107297087808659No Hit
ATTGCGCAATGAAGCATGTGGGGCTTTTCCCAGGCGGCTGCCGAAGATGG660.730816077953715No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA530.5868674565385893No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG470.5204296312700698No Hit
ATTGCGCAATGCTTCGTCTGGGGGGAGGCAGCAGTGAGGAATATTGGTCA440.48721071863580995No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC430.4761377477577234No Hit
ATTGCGCAATGGAAAAGAGGGGGAAAAGAAGGAGGTAAAAATACAGAAAA410.45399180600155026No Hit
ATTGCGCAATGTGAGGGAGGGGAGAATGATAGTGTTAGGAACAAGAATAT390.4318458642453771No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAT380.42077289336729046No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT330.3654080389768575No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT290.3211161554645111No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC250.27682427195216475No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA240.2657513010740782No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC230.25467833019599156No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT220.24360535931790497No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG210.23253238843981838No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT200.22145941756173182No Hit
ATTGCGCAATGACGTCGTCGGGGGCCCCGGGAAGAGTTATCTTTTCTTTT150.16609456317129886No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC150.16609456317129886No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC140.15502159229321227No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTC130.14394862141512568No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT130.14394862141512568No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG120.1328756505370391No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC120.1328756505370391No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.1328756505370391No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGC110.12180267965895249No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG110.12180267965895249No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.12180267965895249No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT110.12180267965895249No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA110.12180267965895249No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT110.12180267965895249No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG110.12180267965895249No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT100.11072970878086591No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAGCG100.11072970878086591No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACTTGTCTGCAAATCT100.11072970878086591No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACTTGTCTGCAAATCG100.11072970878086591No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAGCT100.11072970878086591No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCTCG100.11072970878086591No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)