FastQCFastQC Report
Tue 7 May 2024
EGAF00007823305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2396
Total Bases361.7 kbp
Sequences flagged as poor quality0
Sequence length151
%GC70

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2389.93322203672788No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC733.046744574290484No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG271.1268781302170283No Hit
ATTGCGCAATGGAAGGTTTGGGGAGCTGTGCAGGCGGCGGTTGAGGCTTC190.7929883138564273No Hit
ATTGCGCAATGCGTGCGGGGGGGGATTGTTTGTTTGCCCCAGGGATGCCA160.667779632721202No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC120.5008347245409015No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.41736227045075125No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.25041736227045075No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.25041736227045075No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA50.20868113522537562No Hit
ATTGCGCAATGAAACAGCGGGGGTGGATGCCTTGGCACTAGAAGCCGACG40.1669449081803005No Hit
GCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1669449081803005No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC40.1669449081803005No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1669449081803005No Hit
ATTGCGCAATGGGGGGTTTGGGTGTGTAATACCGTTACCCATGTTTAAAG30.12520868113522537No Hit
ATTGCGAAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG30.12520868113522537No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTAATACACATCTCCGAGCCC30.12520868113522537No Hit
ATTGCGCAATCTGTCTCTTATACACCAGTCTCTTATACACATCTCCGAGC30.12520868113522537No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
GGGCGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTATAGGTTGGATCG30.12520868113522537No Hit
GCCCGGGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
ATTGCGCAATCTGTCTCTTATACACATGTCTCTTATACACATCTCCGAGC30.12520868113522537No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC30.12520868113522537No Hit
GGGGTGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12520868113522537No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)