FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1481
Sequences flagged as poor quality0
Sequence length151
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1067.157326130992573No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC312.0931802835921673No Hit
ATTGCGCAATGGTTACATCGGGAACCTAATAAAACAAAAGTTGCATCAGT201.350438892640108No Hit
ATTGCGCAATGCTCTGGGCGGGTGATGCTCTGTGTGCAACGCGTGCAGCT161.0803511141120865No Hit
ATTGCGCAATGATTTCCGCGGGGGCCAAGTGATAGTGGCACACGGTGGAT151.012829169480081No Hit
ATTGCGCAATGACTGACGAGGGGGGCCTTCCCCGAGCGTCGAACAGTCGA151.012829169480081No Hit
ATTGCGCAATGGGGAATGAGGGGGCCAAGTGATAGTGGCACACGGTGGAT120.8102633355840648No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG110.7427413909520594No Hit
ATTGCGCAATGTCTGCACCGGGGTTGGTGGTGACGCGGGGAAGTGAAACA90.6076975016880486No Hit
ATTGCGCAATGGTATGCTGGGGGCAATCAAGTCAGTCGTAAAGACTTCGC80.5401755570560433No Hit
ATTGCGCAATGTTGTGAGAGGGGATGTGAAGAAGGGTGAGAAGAACTCCA70.4726536124240378No Hit
ATTGCGCAATGGGTATCGGGGGGTGAATGACTAGTGAAATAGATCTTGAA70.4726536124240378No Hit
ATTGCGCAATGAGGTGCTGGATCGTGTCATGCACATGGCTCTGAACCCAT70.4726536124240378No Hit
ATTGCGCAATGTATCTCGGGGGGCACATCCCCGCGGGCAGTGTCGTTACA70.4726536124240378No Hit
ATTGCGCAATGCAACATTCGGGGACTCGACTGGTGTGTTCAAGTCGATCG70.4726536124240378No Hit
ATTGCGCAATGATGGTAGGGGGCGGCTCGTTGTTGGGCATCGTTCATTGA60.4051316677920324No Hit
ATTGCGCAATGGCATAACAGGGGATCTACAAACTTTCAAATCATCAAATT60.4051316677920324No Hit
ATTGCGCAATGAAATCATCGGGATGGCGAAGAAGCGCTGCTTCGACCGGA50.337609723160027No Hit
ATTGCGCAATGCAGTTATTGGGACGAGTGTCTCTTACGACCTTGCCGAGT50.337609723160027No Hit
ATTGCGCAATGCCGTGCCAGGGCACGACGGATGTCACCGGCAGCTTCCGT40.2700877785280216No Hit
ATTGCGCAATGAAGCTTGGGGGGGGAAGTGAAACATCTCAGTACCCGTAG40.2700877785280216No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2700877785280216No Hit
ATTGCGCATTGCTCGAGTTGGGGGACTGTGAACCGTGCTTATGGTGGTGT30.2025658338960162No Hit
ATTGCGCAAGCAGAAGACGGCATACGAGATTCTGACTGTGACTGGAGTTC30.2025658338960162RNA PCR Primer, Index 40 (96% over 29bp)
ATTGCGCAATGTGGACAAGGGGTAAGGGCGCAAGGCGGATGCCTTGGCAC30.2025658338960162No Hit
ATTGCGCAATGGCATGAATGGGGTTGCGTGTGCGGGGTTGTGGGATGCAT30.2025658338960162No Hit
ATTGCGCAATGTAGGGCCGGGGACGTCGGAAATGATGTTTGTACGGGGAG30.2025658338960162No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.2025658338960162No Hit
GGGCGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.2025658338960162No Hit
ATTGCGCAATGGCAACCCCGGGACGTCATTGCGCAATCTGTCTCTTATAC20.1350438892640108No Hit
GCCCGGGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGCAACGGGAGGGGGCTAAACCGCAGGCGTGTGATAGACGA20.1350438892640108No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTATCTTATACACATCTCCGAGC20.1350438892640108No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT20.1350438892640108No Hit
ATTGCGCAATGTCTTACACGGGAGTGTTAACGCGGGGGTGCCTGTCCAGA20.1350438892640108No Hit
GGGGTATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
GCCCGCGGGCCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGGTTACATCGGGAACCTAATAAAACAAAAGATGCATCAGT20.1350438892640108No Hit
ATTGCGCAATGTCTGCACCGGGGTTGGTGGTGACGCGGGGACGTGAAACA20.1350438892640108No Hit
ATTGCGCAATGAAAATTCCGGGGCTGGTCTCATTGCCGCCCGCAGAACTG20.1350438892640108No Hit
ATTGCGCAATCTGTCTCTTATACACCAGTCTCTTATACACATCTCCGAGC20.1350438892640108No Hit
ATTGCGCAATGACTGACGAGGGGGGCCTTCCCCGAGCGGCGAACAGTCGA20.1350438892640108No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCATATACACATCTCCGAGC20.1350438892640108No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC20.1350438892640108No Hit
ATTGCGCAATGGGGAATGAGGGGGCCAAGTGATAGTGGCACACGGTTGAT20.1350438892640108No Hit
ATTGCGCAATGACTGACGAGGGGGGCCTTCCCCGATCGTCGAACAGTCGA20.1350438892640108No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGGATTCGATCG20.1350438892640108No Hit
ATTGCGCATTGAGGGGAAGGGGAGAAAAGAGGGTGGAATATAAGAAAAAA20.1350438892640108No Hit
ATTGCGCAATCAGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG20.1350438892640108No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGTATGCACCGGGGTTGGTGGTGACGCGGGGAAGTGAAACA20.1350438892640108No Hit
GGGGGGTGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGAGATTATCGGGGTTGTGACGCAGCGTCTTAACAAGCGCC20.1350438892640108No Hit
ATTGCGCAATGCTATCCCGGGGTCCCCATTGCGCAATCTGTCTCTTATAC20.1350438892640108No Hit
AGTGCGCAATGGTTACATCGGGAACCTAATAAAACAAAAGTTGCATCAGT20.1350438892640108No Hit
ATTGCGCAATGTGCATTTGGGGCTGTCTGCAAAAGAGTGACAATGTGTCA20.1350438892640108No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCACCGAGC20.1350438892640108No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGCATAGCACGGGACAATGAGCTCTTTGTCTCGCTACTGCG20.1350438892640108No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGTCTCCTGGGGGGGGTCATTTAGTTGGTGGGTGACAGGTG20.1350438892640108No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC20.1350438892640108No Hit
GCGCGGGGGCGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1350438892640108No Hit
ATTGCGCAATGACTGACGAGCGGGGCCTTCCCCGAGCGTCGAACAGTCGA20.1350438892640108No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)