FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2724
Sequences flagged as poor quality0
Sequence length151
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1324.845814977973569No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC582.129221732745962No Hit
ATTGCGCAATGCCTGAGTCGGGATTGAACGAAGAGTTTGATCCTGGCTCA301.1013215859030838No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA180.6607929515418502No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG130.47723935389133626No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.22026431718061676No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.18355359765051393No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG40.14684287812041116No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGA40.14684287812041116No Hit
GGGTTTTGGCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11013215859030838No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT30.11013215859030838No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11013215859030838No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC30.11013215859030838No Hit
GGGGTGTGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11013215859030838No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC30.11013215859030838No Hit
ATTGCGCAATGAGTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGT30.11013215859030838No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)