FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences309587
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTTTTTTTTCGATCAAGGATCACATCGGTTTTCCAAAGAGAATACAC3930.12694331480327017No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG3490.11273083172097019No Hit
CCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAG3160.10207146940924522No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)