FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59865
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG1040.17372421281216072No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG960.16036081182660988No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG820.13697486010189594No Hit
GTACCATTGGTGGCCAATTGATTTGATGGTAAGGGAGGGATCGTTGACCT630.10523678276121273No Hit
CCACTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAG610.10189593251482501No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)