FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7791
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG3043.9019381337440637No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT2322.977794891541522No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1521.9509690668720319No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1471.8867924528301887No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1001.283532280836863No Hit
ATTGCGCAATGCCAGGGTAGGGAGGTGAAAAGCACCCCGATGAGGGGAGT991.2706969580284944No Hit
ATTGCGCAAATGAAATTCGTGGGGCTCTTTCTCTTCAACGAGGCGGCCGA911.1680143755615455No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA480.6160954948016942No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG450.5775895263765883No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT350.44923629829290207No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC300.3850596842510589No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAT300.3850596842510589No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT290.3722243614426903No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC280.3593890386343217No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT230.2952124245924785No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT230.2952124245924785No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG220.2823771017841099No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC210.2695417789757413No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA190.24387113335900398No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC180.23103581055063535No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG150.19252984212552945No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA150.19252984212552945No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT140.17969451931716085No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA140.17969451931716085No Hit
ATTGCGCAATGCTCTGGGTGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC130.1668591965087922No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC120.15402387370042356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.14118855089205495No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT110.14118855089205495No Hit
ATTGCGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAA110.14118855089205495No Hit
ATTGCGCAATGGGATGTCGGGGAGGTGGCAATATCCTGTGATCCGGCGAT110.14118855089205495No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT100.12835322808368632No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC90.11551790527531768No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC90.11551790527531768No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGC90.11551790527531768No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.11551790527531768No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG90.11551790527531768No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.11551790527531768No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT90.11551790527531768No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG90.11551790527531768No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGG80.10268258246694903No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATGT80.10268258246694903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT80.10268258246694903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGGTG80.10268258246694903No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTG80.10268258246694903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT80.10268258246694903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT80.10268258246694903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)