FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3983
Sequences flagged as poor quality0
Sequence length151
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2947.381370826010544No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1313.288978157167964No Hit
ATTGCGCAATGAACACACGGGGTGGCTGAGGAAAAGAAAAGAGAAACAAA511.280441877981421No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG270.6778809942254582No Hit
ATTGCGCAATGTGGGCTGTGGGGCGCGTTTCCGGTTTCCGCCCGCGGGCT260.6527742907356264No Hit
ATTGCGCAATGCGGGCACAGGGAGACAAGCAGCATGTTATTAAATTGGGC240.6025608837559628No Hit
ATTGCGCAATGTGGCATGAGGGCAACGTCTCGACGTCGAGTATCGCGTCG110.2761737383881496No Hit
ATTGCGCAATGAACTTATCGGGGAGACAGTTCGGTCTCTATCCGCCGCGC100.25106703489831783No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA90.22596033140848606No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.20085362791865427No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.17574692442882248No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.1506402209389907No Hit
AGTGCGCAATGAACACACGGGGTGGCTGAGGAAAAGAAAAGAGAAACAAA60.1506402209389907No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.12553351744915892No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACA50.12553351744915892No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.12553351744915892No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC50.12553351744915892No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATGGACGATCT40.10042681395932714No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATGGACGATCG40.10042681395932714No Hit
ATTGCGCAATGAACACACGGGGTGGCTGAGGAAAAGAAAAGAGAAACAAT40.10042681395932714No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.10042681395932714No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.10042681395932714No Hit
ATTGCGCAATGATTCTACCGGGGGGAAATCCCTGATCTCCGACGTTTCTT40.10042681395932714No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC40.10042681395932714No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)