FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823417

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823417
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11758
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG4563.8782105800306175No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCT3803.231842150025514No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1991.6924647048817825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1291.09712536145603No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1140.9695526450076544No Hit
ATTGCGCAATGCTGACTGCGGGTGACAACCAAAGCCAAGGAACTGAAGGA980.8334750807960537No Hit
ATTGCGCAATGTAGCTCTGGGGATAATGGGTCAGTGACTTAGTGTAACAA840.7144072121109032No Hit
ATTGCGCAATGTAGCATTGGGGCTCTTTCTCTTCAACGAGGCGGCCGAGC590.5017860180302772No Hit
ATTGCGCAATGTGGTGCCTGGGGGTTCCAAATCGGAGGTAGAGGGAAGAT590.5017860180302772No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAAT520.442252083687702No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG480.40823269263480183No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC460.3912229971083518No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGA440.3742133015819017No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC380.32318421500255146No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT360.30617451947610136No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG320.2721551284232012No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT320.2721551284232012No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC300.2551454328967512No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT270.22963088960707606No Hit
ATTGCGCAATGGACTCGATGGGGGTTCCAGGAAATAGCCCCTCCATTATA260.221126041843851No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA250.21262119408062596No Hit
ATTGCGCAATGTATACCTGGGGCAGAGGGACAAAAATAAGAGTGATCTGG240.20411634631740092No Hit
ATTGCGCAATGTTCACGCTGGGGTATAAATGATAGGAGAATAATTTCCAG220.18710665079095085No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA200.17009695526450078No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG200.17009695526450078No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.16159210750127573No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA180.15308725973805068No Hit
ATTGCGCAATGGCGTAAGGGGGGGAGGTATAATATGAAAATATTTAATAA180.15308725973805068No Hit
ATTGCGCAATGGCAGATTAGGGGAAAAACCTCTCTATTCAGCACTTCCTC180.15308725973805068No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACC170.14458241197482566No Hit
ATTGCGCAATGTATCGAAAGGGGGTTCCAGGAAATAGCCCCTCCATTATA170.14458241197482566No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA170.14458241197482566No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCTCG160.1360775642116006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC160.1360775642116006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT160.1360775642116006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT140.11906786868515053No Hit
ATTGCGCAATGTGGTGGTTGGGGACCAAGAAGCGAGTACTTACTCTTCGT140.11906786868515053No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCT140.11906786868515053No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG140.11906786868515053No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG140.11906786868515053No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC130.1105630209219255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT130.1105630209219255No Hit
ATTGCGCAATGCGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAG130.1105630209219255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC120.10205817315870046No Hit
ATTGCGCAATGGGGACAAGGGGGAAGGGATTCTTGTTATGCAACAGCAGA120.10205817315870046No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC120.10205817315870046No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCGCG120.10205817315870046No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)