FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9941
Sequences flagged as poor quality0
Sequence length151
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG4104.124333568051504No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT3353.369882305603058No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1521.5290212252288502No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1211.2171813700834926No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1121.126647218589679No Hit
ATTGCGCAATGGAGGGCCCGGGGGGGATACCATTCTCCAAGGCTAAGTAT760.7645106126144251No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG640.6437984106226737No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGA560.5633236092948395No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAAT550.5532642591288603No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC540.543204908962881No Hit
ATTGCGCAATGCGGGACCCGGGGGGGATACCATTCTCCAAGGCTAAGTAT540.543204908962881No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT390.3923146564731918No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT380.38225530630721255No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT380.38225530630721255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT260.26154310431546124No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG250.25148375414948193No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC250.25148375414948193No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCG220.2213057036515441No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA220.2213057036515441No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG200.20118700331958556No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC200.20118700331958556No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT190.19112765315360628No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC190.19112765315360628No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA170.17100895282164771No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT170.17100895282164771No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT160.16094960265566843No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA160.16094960265566843No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCGCG160.16094960265566843No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT160.16094960265566843No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG140.14083090232370987No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG140.14083090232370987No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT130.13077155215773062No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCT130.13077155215773062No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG130.13077155215773062No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT130.13077155215773062No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAG120.12071220199175133No Hit
ATTGCGCAATGCGTGTGGCGGGTGGTAGGAGGGGGGGGATAGAAAAAACG120.12071220199175133No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGG120.12071220199175133No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC120.12071220199175133No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT120.12071220199175133No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC120.12071220199175133No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC110.11065285182577204No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT100.10059350165979278No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT100.10059350165979278No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA100.10059350165979278No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTG100.10059350165979278No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT100.10059350165979278No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)