FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6101
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCATCG2203.6059662350434354No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1732.8356007211932472No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCATCT1722.819209965579413No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC781.2784789378790362No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA691.130962137354532No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCT350.5736764464841829No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG300.49172266841501394No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCAT280.45894115718734635No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCA240.39337813473201116No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCATCG230.3769873791181773No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG220.36059662350434357No Hit
ATTGCGCAATGGGGGACAGGGGAGGACGAGATCATCATTCAGGGAGACTT200.3278151122766759No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC190.3114243566628422No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC170.27864284543517454No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT170.27864284543517454No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT160.26225208982134074No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT160.26225208982134074No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAA140.22947057859367317No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT130.21307982297983935No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA130.21307982297983935No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA130.21307982297983935No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT120.19668906736600558No Hit
ATTGCGCAATGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCA120.19668906736600558No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCC120.19668906736600558No Hit
ATTGCGCAATGCTTGGAAGGGGGACTTTATCTGGAGGCGGTGAAGATAAG110.18029831175217179No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC110.18029831175217179No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC100.16390755613833796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT100.16390755613833796No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCATCTCG100.16390755613833796No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGCAATCCTCATCT100.16390755613833796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT100.16390755613833796No Hit
ATTGCGCAATGATGAAGGCGGGGGCGACGATGGGTAGCCGGCCTGAGAGG100.16390755613833796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG90.1475168005245042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC90.1475168005245042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG90.1475168005245042No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCA90.1475168005245042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC90.1475168005245042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA80.13112604491067037No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT80.13112604491067037No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT70.11473528929683659No Hit
ATTGCGCAATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCA70.11473528929683659No Hit
ATTGCGCAATGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGCA70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCCTGT70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT70.11473528929683659No Hit
ATTGCGCAATGGGGGGGGGGGGGAAACTTGTGAATGTAACTTGCCTGTGC70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCCTG70.11473528929683659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC70.11473528929683659No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)