FastQCFastQC Report
Tue 7 May 2024
EGAF00007823433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10852
Total Bases1.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTATCG4624.257279764098784No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTATCT3283.0224843346848504No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1951.796903796535201No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1601.474382602285293No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1341.234795429413933No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGC920.8477699963140436No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG710.6542572797640988No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC600.5528934758569849No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTAT540.4976041282712864No Hit
ATTGCGCAATGGGGCGGGGGGGTGGACAACACTTTTGCAGATGAGCTGGT500.460744563214154No Hit
ATTGCGCAATGGTTACCGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTT430.39624032436417245No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC410.3778105418356063No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT360.3317360855141909No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGATG350.3225211942499078No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT330.3040914117213417No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT260.2395871728713601No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG260.2395871728713601No Hit
ATTGCGCAATGCTAAGGAAGGGGAAGGTCCCAAGGGTTCGGCTGTTCGCC250.230372281607077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA240.22115739034279397No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG220.2027276078142278No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTAGCG220.2027276078142278No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC210.1935127165499447No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG200.18429782528566163No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG190.17508293402137856No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTATCG180.16586804275709546No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATG180.16586804275709546No Hit
ATTGCGCAATGGTACGCCGGGGATAACAGGCTGATGACCCCCAAGAGTCC170.1566531514928124No Hit
ATTGCGCAATGAGACCCGCGGGGTTATTTAGGGCGCATGGTGGATGCCTT170.1566531514928124No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA170.1566531514928124No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC170.1566531514928124No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG170.1566531514928124No Hit
ATTGCGCAATGATAGGCACGGGGGGGCACATTGGCCTGGAACGAGCTGAC170.1566531514928124No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC160.1474382602285293No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT160.1474382602285293No Hit
ATTGCGCAATGGGGGGCTGGGGCGGGCGGATCACCTGAGGTCAGGAGTTC150.13822336896424622No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA150.13822336896424622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT150.13822336896424622No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAT140.12900847769996315No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCGATCG140.12900847769996315No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT140.12900847769996315No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT130.11979358643568006No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTATCT130.11979358643568006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG130.11979358643568006No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGG130.11979358643568006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGGC130.11979358643568006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT120.11057869517139698No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTATCGCG120.11057869517139698No Hit
GCCATGGTGTTGGAGCAGCTCACAGGGCAGACCCCTGTGTTTTCCAAAGC120.11057869517139698No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT120.11057869517139698No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC120.11057869517139698No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACG120.11057869517139698No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT110.1013638039071139No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGATGGACGCTCTCG110.1013638039071139No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT110.1013638039071139No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT110.1013638039071139No Hit
ATTGCGCAATGTCCACTGTGGGGAAAAAGAGTGATGCTATTTGTTGACAG110.1013638039071139No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)