FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14938
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTATCG5353.581470076315437No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTATCT4312.885259070826081No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3872.5907082608113536No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2491.6668898112197084No Hit
ATTGCGCAATGTCGAACTGGGGGCTCTTTCCGAGCTGCTAGCGCTCCTGC2001.3388673182487616No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1440.9639844691391083No Hit
ATTGCGCATTGGGACTGCTGGGGAAGTAACCTTTGCGGATGCACATCGAC950.6359619761681617No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG720.48199223456955415No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAT660.4418262150220913No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCT650.4351318784308475No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTAT630.4217432052483599No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC620.4150488686571161No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT560.37488284910965325No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC530.3547998393359218No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT500.3347168295621904No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT480.3213281563797028No Hit
ATTGCGCAATGCCTAGTGCGGGGGTTCCAGGAAATAGCCCCTCCATTATA450.30124514660597135No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC430.2878564734234837No Hit
ATTGCGCAATGCCGTATGCGGGGGTTCCAGGAAATAGCCCCTCCATTATA420.28116213683223995No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG360.24099611728477707No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC360.24099611728477707No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT340.22760744410228947No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG340.22760744410228947No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA330.22091310751104565No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG330.22091310751104565No Hit
ATTGCGCAATGCCGAGGTTGGGAACAAGGGCTGAATCTATGATTGCCGGG320.21421877091980182No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTATCG310.20752443432855805No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT290.19413576114607042No Hit
ATTGCGCAATGTGACGTCTGGGGGTTCCAGGAAATAGCCCCTCCATTATA270.18074708796358283No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATG260.174052751372339No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG250.1673584147810952No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA240.1606640781898514No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCGTATCG240.1606640781898514No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT240.1606640781898514No Hit
ATTGCGCAATGTCTGGAATGGGCAGCACGGAAGTGGAAAATGGAAAGTAT230.15396974159860757No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA200.13388673182487618No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTA190.12719239523363235No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAT190.12719239523363235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC190.12719239523363235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG190.12719239523363235No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCC190.12719239523363235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT180.12049805864238854No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG160.10710938545990091No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT150.10041504886865711No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC150.10041504886865711No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)