FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9921
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG3173.1952424150791248No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT2832.852535026711017No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2042.0562443302086484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2022.0360850720693477No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1992.0058461848603972No Hit
ATTGCGCAATGTTCCTTGAGGGGCACGGCCGAATCTCATGTCTCTCGGTA1221.2297147464973288No Hit
ATTGCGCAATGAACGGCAAGGGAAGTCTGGTGCCAGCAGCCGCGGTAATT1141.1490777139401271No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGA660.6652555185969156No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG410.4132647918556597No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAAT400.4031851627860095No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC370.3729462755770588No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC340.34270738836810805No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCG330.3326277592984578No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT320.3225481302288076No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT310.31246850115915736No Hit
ATTGCGCAATGTACCGTGGGGGGGCAAGCGCATTAACAGGTGTGACGCAG310.31246850115915736No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT300.3023888720895071No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT280.2822296139502066No Hit
ATTGCGCAATGGGGCTGGTGGGGTTATTAAGGGCGCATGGTGGATGCCTT280.2822296139502066No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA250.2519907267412559No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT250.2519907267412559No Hit
ATTGCGCAATGCTGAGGCGGGGGTGAGTGACGGTAATGGGTAAAGAAGCA210.21167221046265497No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA190.1915129523233545No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA190.1915129523233545No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.1915129523233545No Hit
ATTGCGCAATGGCGGGTAGGGGGGTCAAGTGAATAAGAGCACGTGGTGGA180.18143332325370426No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC180.18143332325370426No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG180.18143332325370426No Hit
ATTGCGCAATGGGACCAGGGGGAAACGACTGTTTACCAAAAACACAGGTC180.18143332325370426No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC150.15119443604475355No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT150.15119443604475355No Hit
ATTGCGCAATGTCCGGGTTGGGGGGTCAAGTGAATAAGAGCACGTGGTGG140.1411148069751033No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA140.1411148069751033No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGAAATCT130.13103517790545308No Hit
ATTGCGCAATGTATGCTGCTGCTGTCTCTTATACACATCTCCGAGCCCAC130.13103517790545308No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG130.13103517790545308No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCG130.13103517790545308No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC130.13103517790545308No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT120.12095554883580284No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT120.12095554883580284No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCT120.12095554883580284No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG120.12095554883580284No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT110.1108759197661526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGG110.1108759197661526No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGAGAAATCT110.1108759197661526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT110.1108759197661526No Hit
ATTGCGCAATGGGAACAGGGGGATAATAAACCAAAAAAAAAAAAAACAAC110.1108759197661526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT110.1108759197661526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG100.10079629069650238No Hit
ATTGCGCAATGGGAACAGGGGGATAATAAACCAAAAAAAAAAAAAAACAA100.10079629069650238No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG100.10079629069650238No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)