FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9921
Sequences flagged as poor quality0
Sequence length151
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGG4594.626549742969459No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT2902.923092430198569No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC2412.429190605785707No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1101.108759197661526No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGT1081.0885999395222257No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT880.8870073581292208No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAG620.6249370023183147No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGTG530.5342203406914625No Hit
CATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGGGGGGGGGGGGG520.5241407116218123No Hit
CTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGGGGG500.5039814534825118No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTG430.4334240499949602No Hit
CTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGGG420.42334442092530994No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAT360.3628666465074085No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGTT330.3326277592984578No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGAT310.31246850115915736No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG310.31246850115915736No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG310.31246850115915736No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGAT290.29230924301985683No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGTA280.2822296139502066No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC270.2721499848805564No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT270.2721499848805564No Hit
GCAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGAC260.26207035581090615No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG250.2519907267412559No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC240.24191109767160568No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG240.24191109767160568No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC220.2217518395323052No Hit
ATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGGGGGGGG210.21167221046265497No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC190.1915129523233545No Hit
CATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGTGGGGGGGGGGG190.1915129523233545No Hit
GTCCTACGCCGCTCATGCTCAGGACCACTACACCTGCATGTTCAGGCGTA190.1915129523233545No Hit
AGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA180.18143332325370426No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT170.17135369418405402No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT170.17135369418405402No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA160.1612740651144038No Hit
TTTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGA160.1612740651144038No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA150.15119443604475355No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCA150.15119443604475355No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC150.15119443604475355No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT130.13103517790545308No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGG130.13103517790545308No Hit
CAGCAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG130.13103517790545308No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGA120.12095554883580284No Hit
CATCTGACGCTGCCGACGATCGATATGAGGTGGGGGTGGGGGGGGGGGGG120.12095554883580284No Hit
GCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.1108759197661526No Hit
CTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGGGGTGGG110.1108759197661526No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC110.1108759197661526No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG110.1108759197661526No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAAT110.1108759197661526No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAA100.10079629069650238No Hit
CTTATACACATCTGACGCTGCCGACGATCGATATGAGGTGGGGGTGGGGG100.10079629069650238No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)