FastQCFastQC Report
Tue 7 May 2024
EGAF00007823477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6873
Total Bases1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC55

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG2583.7538192928852028No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT2183.171831805616179No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1412.0515058926233087No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1151.6732140258984431No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC741.0766768514476939No Hit
ATTGCGCAATGCTAGCCCAGGGGGAGAAAAGGAAAAAAAGAAGATAGCAC670.9748290411756148No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG430.6256365488142005No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA340.4946893641786702No Hit
ATTGCGCAATGGTTATCAAGGGATTAGCAAAAAAAACTCACAAAAATTAG270.39284155390659103No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT270.39284155390659103No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.3782918667248654No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC250.3637421795431398No Hit
ATTGCGCAATGTGTTAAGGGGGAAAAAACCATGAATAGAACAAACAGCAC240.3491924923614142No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAT220.32009311799796303No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT180.2618943692710607No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA180.2618943692710607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC160.23279499490760946No Hit
ATTGCGCAATGCAATGCGGGGGGAAGGGAACATATCAATGGGGGGAGAAG160.23279499490760946No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT140.2036956205441583No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT130.1891459333624327No Hit
ATTGCGCAATGGCGCCTTCGGGGATCAAGAGACTAAGAGCACACGGTGGA130.1891459333624327No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC110.16004655899898151No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG110.16004655899898151No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT110.16004655899898151No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA100.14549687181725593No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG100.14549687181725593No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG100.14549687181725593No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT100.14549687181725593No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA100.14549687181725593No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT100.14549687181725593No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG90.13094718463553034No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG90.13094718463553034No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCGCG90.13094718463553034No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG90.13094718463553034No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTG90.13094718463553034No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC90.13094718463553034No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT80.11639749745380473No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.11639749745380473No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC70.10184781027207915No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGC70.10184781027207915No Hit
ATTGCGCAATGACTGCTCGGGGAAGGGAACATATCAATGGGGGGAGAAGA70.10184781027207915No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.10184781027207915No Hit
ATTGCGCAATGACGCTTTTGGGAAGTTTTAAAAAAATCGTAGCTATTGAA70.10184781027207915No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC70.10184781027207915No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG70.10184781027207915No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)