FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14385
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCG5964.143204727146333No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCT5163.5870698644421273No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3092.148070907194995No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2912.0229405630865482No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1841.2791101842196733No Hit
ATTGCGCAATGTGGAGAGTGGGAGAAGAAAGAGGATTTGTGGTGGTAGAA860.5978449774070211No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCT850.5908932916232186No Hit
ATTGCGCAATGGCACGGATGGGCTGGATGTGGAGTGCTCTGTAGGCTGCA830.5769899200556136No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGAT780.5422314911366006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC730.5074730622175878No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG710.49356969064998263No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT540.3753910323253389No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT530.3684393465415363No Hit
ATTGCGCAATGTTTCGCGTGGGGGTTCCAGGAAATAGCCCCTCCATTATA530.3684393465415363No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT500.3475842891901286No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC500.3475842891901286No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC480.33368091762252344No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC390.2711157455683003No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC360.2502606882168926No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCG350.24330900243309003No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG340.23635731664928744No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA330.22940563086548488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC300.20855057351407716No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA300.20855057351407716No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGAGCG290.2015988877302746No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG280.19464720194647203No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA270.18769551616266944No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC240.16684045881126172No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG240.16684045881126172No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC230.15988877302745916No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC200.13903371567605144No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG200.13903371567605144No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT190.13208202989224888No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCT190.13208202989224888No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT180.1251303441084463No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGAGCT180.1251303441084463No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT180.1251303441084463No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGC180.1251303441084463No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGG170.11817865832464372No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC170.11817865832464372No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCGCG170.11817865832464372No Hit
ATTGCGCAATGGGACCCAAGGGGGAAACAGGTTAATATTCCTGTACCTCT160.11122697254084114No Hit
ATTGCGCAATGCGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAG160.11122697254084114No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG160.11122697254084114No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG150.10427528675703858No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCGGATCG150.10427528675703858No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)