FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8523
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG2953.4612225742109586No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT2863.355625953302828No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2412.827642848762173No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2012.3583245336149243No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1231.4431538190777895No Hit
ATTGCGCAATGCAGCTGTGGGGAAGAAGACAAGCTCACTGTTGAGCGTGC1001.1732957878681216No Hit
ATTGCGCAATGGAGTCACCGGGAGAGCTCTGGAGGTAGAGGTGACCGATC570.6687785990848293No Hit
ATTGCGCAATGTCGACACTGGGATAGAAGAGATGGAAGCGGATGAGGGGT540.6335797254487857No Hit
ATTGCGCAATGGGATATCAGGGACGACAAACAGTGTGAAAGACACTGTCG520.6101138096914231No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA490.5749149360553796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG430.5045171887832923No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT360.42238648363252373No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT350.4106535257538425No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC300.3519887363604365No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT280.32852282060307403No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAT280.32852282060307403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC270.31678986272439286No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC250.2933239469670304No Hit
ATTGCGCAATGGGTCAGTGGGGGTAGTGCCTCGTAACTAACTCTCGGGGG240.2815909890883492No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT220.2581250733309867No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA220.2581250733309867No Hit
ATTGCGCAATGGCTGGACCGGGGAACTTGGAGATAGCTGGTTCTCTCCGA220.2581250733309867No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.22292619969494307No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG160.18772732605889944No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC150.17599436818021824No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA150.17599436818021824No Hit
ATTGCGCAATGGTTATCCGGGGGGAACGCGCGCAGACGGTAGGAAAGCGT140.16426141030153701No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT130.1525284524228558No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCGCG130.1525284524228558No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT130.1525284524228558No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.1407954945441746No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA120.1407954945441746No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT120.1407954945441746No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.12906253666549336No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT110.12906253666549336No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT110.12906253666549336No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTG110.12906253666549336No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT110.12906253666549336No Hit
ATTGCGCAATGTTTTTGCGGGGGTCCCTATCTTCCGTGGGCGCTGCAGAT110.12906253666549336No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG100.11732957878681216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG100.11732957878681216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC100.11732957878681216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT90.10559662090813093No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC90.10559662090813093No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGC90.10559662090813093No Hit
ATTGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.10559662090813093No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT90.10559662090813093No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)