FastQCFastQC Report
Tue 7 May 2024
EGAF00007823515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2391
Total Bases361 kbp
Sequences flagged as poor quality0
Sequence length151
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1566.524466750313676No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC482.0075282308657463No Hit
ATTGCGCAATGAGGGGCACGGGGACTCGAGACAAGGTCCTGATTAGAATC361.5056461731493098No Hit
ATTGCGCAATGGTAGTGGAGGGGCGTCCTCGCAAAATTATCCTGCTCGTC150.6273525721455459No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG150.6273525721455459No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA130.5437055625261397No Hit
ATTGCGCAATGGCAGTGCAGGGGCGTCCTCGCAAAATTATCCTGCTCGTC130.5437055625261397No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACAACTCCGAGC40.1672940192388122No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA40.1672940192388122No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1672940192388122No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC40.1672940192388122No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC40.1672940192388122No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATATCCGAGC30.12547051442910914No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTAATACACATCTCCGAGC30.12547051442910914No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.12547051442910914No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12547051442910914No Hit
ATTGCGCAATGGGTCTATGGGGGAGGTCTGTCGACGATCGGGAGAGCAGG30.12547051442910914No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12547051442910914No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12547051442910914No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.12547051442910914No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12547051442910914No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA30.12547051442910914No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)