FastQCFastQC Report
Tue 7 May 2024
EGAF00007823516

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823516
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2391
Total Bases361 kbp
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT2279.493935591802593No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC743.094939355918026No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC241.0037641154328731No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT230.9619406106231703No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGG110.4600585529067336No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.4600585529067336No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGGGGGGGGGG110.4600585529067336No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGT90.37641154328732745No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGGGGGGG90.37641154328732745No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGGGGGGGGG80.3345880384776244No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80.3345880384776244No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTTGTGGG70.2927645336679214No Hit
GGGTCGGCAGCCCTGTCATCATCCTCACAGGGAGGAGCTCAGGGGTCCAT70.2927645336679214No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTGGGGGGGGGGG70.2927645336679214No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC70.2927645336679214No Hit
GAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA60.2509410288582183No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC60.2509410288582183No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGGTGTGGGGGTGTG60.2509410288582183No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGG60.2509410288582183No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.2509410288582183No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTG50.20911752404851527No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTG50.20911752404851527No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGG50.20911752404851527No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT40.1672940192388122No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGG40.1672940192388122No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGGGGGGG40.1672940192388122No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1672940192388122No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTGGG40.1672940192388122No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTG40.1672940192388122No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTT40.1672940192388122No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAG40.1672940192388122No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTA40.1672940192388122No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGTGGGGGGGGGGG40.1672940192388122No Hit
GTACATAAGAGGAAGTGTCTCATGTCACAGACGCTACGCCCCACTCCCTG40.1672940192388122No Hit
GGTAGAGCCACTTCTGGGTGATCCACTGTGCTGAGCCCTTCAGTCATCCC40.1672940192388122No Hit
GGAGCTCAGGGGTCCATTAGTGGAGAGCGAAGTCTCTAGAACGCCAGGTT40.1672940192388122No Hit
TCTTGACATAGTGTCCGGCGCCGCCACCGCCGACCCAGTCACAGCATGGC40.1672940192388122No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGCGGGGGGGGGG40.1672940192388122No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTTGTGGGGGGGGGGG30.12547051442910914No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGGGGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGTGGGGGGG30.12547051442910914No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTGGTGGGGGGGGGGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGGGGGGGGGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGGGGGGGGGGGGGGG30.12547051442910914No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTAGATATCGGTGG30.12547051442910914No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGGC30.12547051442910914No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGGG30.12547051442910914No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG30.12547051442910914No Hit
GTGTATAAGAGACAGAGTGCGCAATCTGTCTCTTATACACATCTGACGCT30.12547051442910914No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGGGGGGC30.12547051442910914No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGTGGGGGGG30.12547051442910914No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGG30.12547051442910914No Hit
ATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG30.12547051442910914No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGCGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGGGGGGGGGGGGG30.12547051442910914No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG30.12547051442910914No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCA30.12547051442910914No Hit
GGTCCATTAGTGGAGAGCGAAGTCTCTAGAACGCCAGGTTGGGGCACAGG30.12547051442910914No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTAGATCTCGGTGG30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGGGGGGGGGGGGG30.12547051442910914No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAA30.12547051442910914No Hit
GGTACAGCAGTGCCTTCTGGTAGTCACCCTTGGTGTCTTGCTGGATGTAG30.12547051442910914No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGGGGG30.12547051442910914No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC30.12547051442910914No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGGGTGGGGGGGGGGG30.12547051442910914No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)