FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13836
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1030.744434807747904No Hit
ATTGCGCAATGACAGCCACCGGGTCATCACCTTCGCAAACCAGGACGACT370.2674183289968199No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC360.26019080659150046No Hit
ATTGCGCAATGCGCATACGGGGGGGCTCACCTGGCCTGGGAGACCCATCT270.19514310494362533No Hit
ATTGCGCAATGGATGCACGGGGCAGTCCTTCTCAGAATAGTCCAATTCAT200.14455044810638912No Hit
ATTGCGCAATGGGTACACAGGGGGGCGGCTGTGGTGGTGCCTTCTGGACA200.14455044810638912No Hit
ATTGCGCAATGGGCAAGTTGGGAGGAGGGACAGAGAGACAGGGAGAGTCA190.13732292570106966No Hit
ATTGCGCAATGCGAAAACCGGGGGGTGTAGTGATGGGATCACAGCTTATT190.13732292570106966No Hit
ATTGCGCAATGCTCTTGGTGGGCATGTGGGACGTTTCTGCATTTGGACTG190.13732292570106966No Hit
ATTGCGCAATGGCCGTCTTGGGGGTGCCGCTGGCCGAGAGCGTGGTGAAG190.13732292570106966No Hit
ATTGCGCAATGTGGTCGGGGGCGTAGCATCATAGTAGTTTTTACAGCTGT170.12286788089043077No Hit
ATTGCGCAATGTGGTTCCGGGGCACTATTCTTAGCATCTCAGGCAGATGA170.12286788089043077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA170.12286788089043077No Hit
ATTGCGCAATGGGGCTTTGGGGCTGATGTTCGCCGACCGTTGACTATTCT160.11564035848511131No Hit
ATTGCGCAATGCACTACACGGGATGGCACATGCAGCGCAAGTAGGTCTAC150.10841283607979184No Hit
ATTGCGCAATGACAGCGCAGGGGTCCTAGCTACTTGGGAGGCTGAGGCAG140.1011853136744724No Hit
ATTGCGCAATGCTGGTCCAGGGGGTCATCCGGGAGGACAACCAGACCAAC140.1011853136744724No Hit
ATTGCGCAATGATTTCCGCGGGAATGCCCCAACTAAATACTACCGTATGG140.1011853136744724No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)