FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2504
Sequences flagged as poor quality0
Sequence length151
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1746.94888178913738No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC682.7156549520766773No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG210.8386581469648562No Hit
ATTGCGCAATGGGCGGATTGGGCAAATTTTCAACTTGAGAGTTTGATCCT190.7587859424920127No Hit
ATTGCGCAATGATCGACCCGGGGGGGGCCCGCACAAGCGGTGGAGTATGT180.7188498402555911No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA130.5191693290734825No Hit
ATTGCGCAATGAAAGGCGAGGGCGGGCATGCTGGGTCGCTACTTGCACTC130.5191693290734825No Hit
ATTGCGCAATGAAGAAGGTGGGAGCAACTTGGACAGCAACAGGGACAATG120.4792332268370607No Hit
ATTGCGCAATGAATACGATGGGGATGGATGCTGAGAAGCGCATCCGGTTA60.23961661341853036No Hit
ATTGCGCAATGTTCCTGTTGGGGGGGTGAAAGGCTAAACAAACTTGGAGA60.23961661341853036No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1996805111821086No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1996805111821086No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC50.1996805111821086No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1597444089456869No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC40.1597444089456869No Hit
GGGGGAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1597444089456869No Hit
ATTGCGCAATCTGTCTCTTATACACTGTCTCTTATACACATCTCCGAGCC40.1597444089456869No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTGTCTTATACACATCTCCGAGC30.11980830670926518No Hit
ATTGCGCAATCTGTCTCTTAAACACCTGTCTCTTATACACATCTCCGAGC30.11980830670926518No Hit
GGTGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11980830670926518No Hit
ATTGCGCAATCTGTCTCTTATACACGTGTCTCTTATACACATCTCCGAGC30.11980830670926518No Hit
GCGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11980830670926518No Hit
GCGTGCGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11980830670926518No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11980830670926518No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)