FastQCFastQC Report
Tue 7 May 2024
EGAF00007823539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2110
Total Bases318.6 kbp
Sequences flagged as poor quality0
Sequence length151
%GC68

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1778.388625592417062No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC693.2701421800947865No Hit
ATTGCGCAATGACGCTCGGGGGAGGTTAACCCGTTGTGTGGGGTAGCCGT281.3270142180094786No Hit
ATTGCGCAATGGGGGAAAAGGGTACCGAAAGCACAGTAGTCACCGGTGTT251.1848341232227488No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG210.9952606635071091No Hit
ATTGCGCAATGTGGACACGGGGGAGACAAAAAGGAAAGGACAAAAGAAAA100.47393364928909953No Hit
ATTGCGCAATGGTCTCTAAGGGGAGGCCTTTCATCGTGATTATGAGCCAA90.42654028436018954No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.37914691943127965No Hit
ATTGCGCAATGGGTGAGTCGGGTCCTAAGGCGAGGCCGACAGGCGTAGTC70.33175355450236965No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.2843601895734597No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.2843601895734597No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.23696682464454977No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA50.23696682464454977No Hit
ATTGCGCAATCTGACTCTTATACACCTGTCTCTTATACACATCTCCGAGC40.18957345971563982No Hit
ATTGCGCAATGTTCACGGGGGGCTTGGCACCAAGAGCCGATGAAGGACGT40.18957345971563982No Hit
GGGGGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.18957345971563982No Hit
ATTGCGCAATGCCAGTTACGGGGATCAGCATGCCGCGGTGAATACGTTCC40.18957345971563982No Hit
ATTGCGCAATGTTCAAAGAGGGCCGTGCCACAGGGCACCGGTGCATCGAT40.18957345971563982No Hit
GGCTGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.18957345971563982No Hit
ATTGCGCAATGATGATGGTGGGAGGGTAACCCACGTAAGGTCGTTGGCAG40.18957345971563982No Hit
ATTGCGCAATGAGACACCAGGGGGGAGCGATTTCCCGCTGGAAGTCACCT40.18957345971563982No Hit
GCCCGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.14218009478672985No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.14218009478672985No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.14218009478672985No Hit
ATTGCGCAATCTGTCTCATATACACCTGTCTCTTATACACATCTCCGAGC30.14218009478672985No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT30.14218009478672985No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.14218009478672985No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC30.14218009478672985No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.14218009478672985No Hit
GGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.14218009478672985No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACCTCTCCGAGC30.14218009478672985No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14218009478672985No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTAGACACATCTCCGAGC30.14218009478672985No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)