FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2110
Sequences flagged as poor quality0
Sequence length151
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT27913.222748815165877No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC1115.260663507109005No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC291.3744075829383886No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGG150.7109004739336493No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGT140.6635071090047393No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130.6161137440758294No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGGGGGGGGGG130.6161137440758294No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGGGGGGGGGG110.5213270142180095No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGGGGGGGGG100.47393364928909953No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTGGGGGGGGGGG90.42654028436018954No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGG90.42654028436018954No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTG70.33175355450236965No Hit
CTCTTAGGGGCCTTAACCGGCGATCTGGGCTGTTTCCCTCTCGACTAACG70.33175355450236965No Hit
GAACCAGCTATCACGGAGTTTGATTGGCCTTTCACCCCTACCCAAAGCTC60.2843601895734597No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG60.2843601895734597No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGGGGGGGGGGGGG50.23696682464454977No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGG50.23696682464454977No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC50.23696682464454977No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTAGATCTCGG50.23696682464454977No Hit
CATCTGACGCTGCCGACGAGCGTAATGGTGTGGGGGTGGGGGGGGGGGGG50.23696682464454977No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGGTGTGGGGGTGGGGG40.18957345971563982No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTTGTGGGGGGGGGGG40.18957345971563982No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGGGGG40.18957345971563982No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.18957345971563982No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGGTGTGGGGGTGTGGG40.18957345971563982No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTGGGGGG40.18957345971563982No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGGG40.18957345971563982No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGG40.18957345971563982No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATGT40.18957345971563982No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGGGGGGG40.18957345971563982No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGG40.18957345971563982No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.18957345971563982No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGGGG40.18957345971563982No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGG40.18957345971563982No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGTGGGGGGGGGGG40.18957345971563982No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGG40.18957345971563982No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGGGGGGG40.18957345971563982No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTG30.14218009478672985No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGGGGG30.14218009478672985No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAATA30.14218009478672985No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGG30.14218009478672985No Hit
CGGTAGTCCAGGAGAGCAACCATACCATCTGGATTCATGTTTTCACCAAT30.14218009478672985No Hit
CAACCATACCATCTGGATTCATGTTTTCACCAATAAAAACTGGTAGTTAT30.14218009478672985No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGGGGGGGG30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGTGGGGGGG30.14218009478672985No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGTGGGGGGG30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGTATATCTCGGTGGTCGCC30.14218009478672985Illumina Single End PCR Primer 1 (95% over 21bp)
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGGTGGGG30.14218009478672985No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTAGATCTCGGTGG30.14218009478672985No Hit
ATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTGGTGGGGGGGGGGG30.14218009478672985No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTG30.14218009478672985No Hit
GTCCTGGTGTTGTATGGATGGTAAGCAGCAGCCAATTATGGTGACAGGTG30.14218009478672985No Hit
GTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGGTGGGGGGG30.14218009478672985No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTT30.14218009478672985No Hit
CTCTAAGCCATCCTTAAAGAAAATCATGAATGGAGTCACACCATCTTCAC30.14218009478672985No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGTGGG30.14218009478672985No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTCGGGGGGGGGG30.14218009478672985No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)