FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74201
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG2770.3733103327448417No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG1550.20889206344927966No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1320.17789517661487042No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGC1310.1765474858829396No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT1020.13746445465694532No Hit
CTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAG930.1253352380695678No Hit
CCACTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAG820.11051064001832861No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG750.10107680489481274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)