FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13593
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC6024.428750091959096No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCG3852.83234017509012No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3652.6852056205399837No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCT2451.8023982932391671No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1070.7871698668432282No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAAT670.4929007577429559No Hit
ATTGCGCAATGCTATGGCCGGGGGTGAAGCGAACCCGGGGAACTGAAACA660.48554403001544916No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG610.4487603913779151No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTT570.4193334804678879No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG570.4193334804678879No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAAC560.41197675274038104No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCG530.3899065695578607No Hit
ATTGCGCAATGTTAACGAGGGGGTTCTGGAGGAGAGAGGGACTGTAAGCG520.38254984183035384No Hit
ATTGCGCAATGTTTGTTGGGGGTGAAGCGAACCCGGGGAACTGAAACATC380.2795556536452586No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC350.2574854704627382No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT330.24277201500772458No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACA330.24277201500772458No Hit
ATTGCGCAATGACATCATGGGGGGGCGCGGGCCTGGGCGAGGTGGAGCAG320.23541528728021777No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT280.20598837637019052No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA280.20598837637019052No Hit
ATTGCGCAATGTGACGTCCGGGTGACGGTAACCGGAGAAGAAGCCCCGGC270.19863164864268373No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.19127492091517692No Hit
ATTGCGCAATGTTATGCCGGGGGTGAAGCGAACCCGGGGAACTGAAACAT250.18391819318767014No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCT210.15449128227764292No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT210.15449128227764292No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAA200.1471345545501361No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGGTAATCG200.1471345545501361No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG180.13242109909512248No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG170.1250643713676157No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC170.1250643713676157No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC170.1250643713676157No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC160.11770764364010888No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC160.11770764364010888No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAAC160.11770764364010888No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG160.11770764364010888No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG150.11035091591260207No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT150.11035091591260207No Hit
ATTGCGCAATGGATTTCTGGGGGAGGGTGATGCAGTGAAGCGCGGGGATG150.11035091591260207No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC150.11035091591260207No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGT150.11035091591260207No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC140.10299418818509526No Hit
ATTGCGCAATGCGACGTGGGGGTACCTCAGGGGTTGCGGACAGTCCAAAA140.10299418818509526No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA140.10299418818509526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT140.10299418818509526No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)