FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences209826
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATACTATCG4970.23686292451841048No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4280.20397853459533138No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATACTATCT3990.19015755912041404No Hit
ATTGCGCAATGCACTCAACGGGAGCTGAGGTAGGGACGTGCTGTAGGCCG3150.15012438877927425No Hit
ATTGCGCAATGCTCATCACGGGGGCGTCTTGTTCTTGCCTGGTGTCGGTG2910.13868634011037717No Hit
ATTGCGCAATGTTCACGTCGGGGGCGTCTTGTTCTTGCCTGGTGTCGGTG2760.13153755969231648No Hit
ATTGCGCAATGGGGATGTGGGGGCGTCTTGTTCTTGCCTGGTGTCGGTGG2740.1305843889699084No Hit
ATTGCGCAATGCTCTTCCGGGGACGTTGTCTGCAGGCACTCAGAATGGTC2730.13010780360870436No Hit
ATTGCGCAATGAACGGCCAGGGGTCCTTTCAGCGGAGCGCGGCGGCAAGA2690.12820146216388817No Hit
ATTGCGCAATGCTCGATCCGGGGCTTGGAAAGATGGCGTCCCGCAAGGAA2530.12057609638462345No Hit
ATTGCGCAATGCACATGAGGGGGATCTCTCTCGGGTGGAGTCTTCTGACA2520.1200995110234194No Hit
ATTGCGCAATGGACCGGGTGGGGCCCCGCAGCGCCGGAGTCAAAGCCGGT2520.1200995110234194No Hit
ATTGCGCAATGGCGCGCACGGGGCTCTTCCTGTCTGTACCAGGGCGGCGC2350.11199755988295064No Hit
ATTGCGCAATGCTGCAAACGGGGCTCTACCGGCGGGATTTGATGGCGTGA2320.1105678037993385No Hit
ATTGCGCAATGACTTCCGCGGGGCAGGAAAAGGTCCCGGAGAGCTGAGCA2300.10961463307693042No Hit
ATTGCGCAATGTGTTCACGGGGGCCCTTTCATCAGTCTTCCCGCGTCCGC2280.10866146235452231No Hit
ATTGCGCAATGGACGCCAGGGGTGCAGCTCCAGCAGCAATGGCAGTGACG2270.10818487699331827No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2240.10675512090970614No Hit
ATTGCGCAATGACGACGAGGGGCCCGCAGCGCCGGAGTCAAAGCCGGTTC2230.10627853554850208No Hit
ATTGCGCAATGATACACACGGGGGCCATTACTGCAGGAAAAGGTCCCGGA2180.10389560874248187No Hit
ATTGCGCAATGAAGGCTCCGGGGCCTTTCCTTTCAGCGGAGCGCGGCGGC2150.10246585265886972No Hit
ATTGCGCAATGAACTGTCAGGGGGGAGTTCGGCATGCAAGAGCGGAAGAA2140.10198926729766569No Hit
ATTGCGCAATGATGCTCTGGGGGAAGAGAGGCGAAGCCAGGTCACCTTTC2120.10103609657525758No Hit
ATTGCGCAATGCGAGCCCCGGGGGGCTGCACTGGACGTGTTTACGGAAGA2110.10055951121405356No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)