FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11002
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4063.690238138520269No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCATCG3823.4720959825486273No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCATCT2742.490456280676241No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2402.1814215597164153No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA930.8453008543901109No Hit
ATTGCGCAATGTCGACGCAGGGTGACCAACAGCTAAGGCCCCCAATTCGT750.6816942374113798No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG660.5998909289220142No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG590.5362661334302854No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCAT560.5089983639338302No Hit
ATTGCGCAATGTGGCGCACGGGGGGCGCAACATGGATTCGATACCCATTT520.4726413379385566No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGT480.4362843119432831No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT460.4181057989456462No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC450.4090165424468279No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT420.3817487729503727No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT390.3544810034539175No Hit
ATTGCGCAATGTCGCACGGGGGGCGCAACATGGATTCGATACCCATTTAG370.3363024904562807No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG330.2999454644610071No Hit
ATTGCGCAATGCACTCCGCGGGGAGGCAGCAGTGGGGAATATTGGACAAT330.2999454644610071No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC320.2908562079621887No Hit
ATTGCGCAATGCTTGTACCGGGATGCTTCCAGCTAACAGGTCTAGAAAAC320.2908562079621887No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGC320.2908562079621887No Hit
ATTGCGCAATGTCATGGTCGGGGTGAAGGGACAGTCGTGAGACATCCTGG310.2817669514633703No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG290.2635884384657335No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.2363206689692783No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.2363206689692783No Hit
ATTGCGCAATGTGGCAGGAGGGGACCCTGCGGTCTGGAAAGGCCAAGCTG250.22723141247045991No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA240.21814215597164155No Hit
ATTGCGCAATGCATTGATCGGGCTATCATGGGGGGGCATGTTTTGACATT230.2090528994728231No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC220.19996364297400473No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC210.19087438647518634No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC200.18178512997636792No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC190.17269587347754956No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCAGCG190.17269587347754956No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT180.16360661697873113No Hit
ATTGCGCAATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGC170.15451736047991274No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG170.15451736047991274No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT170.15451736047991274No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCATCG160.14542810398109435No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC160.14542810398109435No Hit
ATTGCGCAATGGCGGGACGGGGGAAAGTCCGAGCCTTAGGACCCAGTTTC150.13633884748227595No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT150.13633884748227595No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT140.12724959098345756No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG140.12724959098345756No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCATCT130.11816033448463915No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCG130.11816033448463915No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT130.11816033448463915No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCTCGTCAGCT120.10907107798582077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG120.10907107798582077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)