FastQCFastQC Report
Thu 5 Jan 2023
EGAF00007826502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007826502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80553072
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACCTGTATCTCGTATGC5584380.6932547525934206TruSeq Adapter, Index 8 (97% over 38bp)
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT873960.10849493114303574No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)