Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007829394 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10825480 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 39384 | 0.3638083484519855 | No Hit |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 22024 | 0.2034459441983173 | Illumina Single End PCR Primer 1 (100% over 50bp) |
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT | 12440 | 0.11491407309421844 | Illumina Single End PCR Primer 1 (100% over 50bp) |
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC | 11426 | 0.10554728289184406 | No Hit |