FastQCFastQC Report
Sun 21 May 2023
EGAF00007832347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences184669
Sequences flagged as poor quality0
Sequence length247-250
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4502624.382002393471563No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC2735114.810823689953375No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2675114.485918047966903No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2454613.291889813666613No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG2107211.410686146564936No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA27971.5146018010602753No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGGAAGAAGCGGC19781.0711055997487398No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT18881.0223697534507687No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA18551.0044999431415127No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC11910.6449376993431492No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAGCCGCAGTGGAATCCGTTGTGCG11780.6378980771001088No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC11260.6097395881279478No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC10530.5702094016862603No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC10060.5447584597306533No Hit
GGAAGTAAAAGTCGTAACAAGGAAGCGCAGGTGCTGCAGGACGGTCGTCA9290.5030622356757225No Hit
GGAAGTAAAAGTCGTAACAAGGGCCGTGAAGTAAGCGGGAAGCATATTGA8100.43862261668173874No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT7470.40450752427315906No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC7220.39096978919038927No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG7000.37905658231755196No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG6940.37580752589768723No Hit
GGAAGTAAAAGTCGTAACAAGGCGAGGACAAGCGGTGAGATAACCGATGC6910.3741829976877548No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATT6840.3703924318645793No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC4680.25342640074944905No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC4650.25180187253951664No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT4470.24205470327992246No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC4270.23122451521370668No Hit
GGAAGTAAAAGTCGTAACAAGGACGTGGGGCAGAAGGTGGAAAATGCGTG4110.22256036476073407No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGAAGGAAGCGGC4050.21931130834086937No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC3660.1981924416117486No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGCTGGATC3450.18682074414222205No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC3370.18248866891573573No Hit
GGAAGTAAAAGTCGTAACAAGGAATCATCATGCAGTGAGGAAGGATCATG3320.17978112189918177No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA3050.16516036800979048No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA3030.1640773492031689No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG2760.1494565953137776No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCGAGGAAACGAGCGATGCCTACCAA2650.14349999187735896No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGGAAGAAGTAATGGCAGTTATAAAC2540.13754338844094027No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC2530.1370018790376295No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC2420.13104527560121082No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT2420.13104527560121082No Hit
GGAAGTAAAAGTCGTAACAAGGATAGGTGAAATCTCAGAGAAAGCGTAGA2390.12942074739127846No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCTGAACTGACGTGGGAACAGGTCCG2270.12292263455154899No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2220.12021508753499505No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT1990.10776037125884691No Hit
GGAAGTAAAAGTCGTAACAAGGGATGGGAAAGAGTCACTATTGAGAGAGC1970.10667735245222533No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)