FastQCFastQC Report
Sun 21 May 2023
EGAF00007832356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences271289
Sequences flagged as poor quality0
Sequence length235-238
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG11299841.65226013586987No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGAT4523516.674100313687617No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT245489.048652912576625No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA133694.927955058996126No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG96653.5626214111150842No Hit
GCTGCGTTCTTCATCGATGAGGCAAGCACTGGCTGCGTTCTTCATCGATG86103.173737232250478No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA62042.286860138081529No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGGC51651.9038737287542067No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG31781.1714444743428594No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA28121.036532996177508No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT25100.9252125961612891No Hit
GCTGCGTTCTTCATCGATGCGGCAAGCACTGGCTGCGTTCTTCATCGATG14690.5414889656418063No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT11750.433117450394229No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT9640.35534061462130795No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCAAGATATCCGTTGCCGAGAGTCG9450.3483370132957842No Hit
GCTGCGTTCTTCATCGATGCGAAGAAAGGCATGCTGCACCGCGCCGACTT9180.33838452720161893No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG9160.3376473060094586No Hit
GCTGCGTTCTTCATCGATGAGGCAAGCACTGGCTGCGTTCTTCATCGGCT8680.3199539973976092No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG8250.3041037417661608No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCA8020.29562569805631633No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA7050.2598704702365374No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCGAG6820.2513924265266929No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCGAGATATCCGTTGCCGAGAGTCG6480.23885966625996632No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCA6260.230750233146202No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT6000.22116635764811696No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG5750.21195109274611207No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACCATGTGTT5720.2108452609578715No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA5120.1887286251930598No Hit
GCTGCGTTCTTCATCGATGCAGGCAAGCACTGGCTGCGTTCTTCATCTGC4520.1666119894282481No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG3630.13380564637711076No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG3190.1175867801495822No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3100.11426928478486043No Hit
GCTGCGTTCTTCATCGATGCTCGTGCGCCATTCCGTTACGATGGATCTCA3070.11316345299661984No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT2970.10947734703581789No Hit
GCTGCGTTCTTCATCGATGCGACCGAACTCGATCTCTTCCAGCTCTTCCT2760.10173652451813381No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC2730.10063069272989321No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)