FastQCFastQC Report
Sun 21 May 2023
EGAF00007832383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59163
Sequences flagged as poor quality0
Sequence length247-250
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4422874.75618207325525No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA19553.3044301336984265No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG14832.5066342139512874No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG13922.352821865016987No Hit
GGAAGTAAAAGTCGTAACAAGGATAGAGACTTGGTATGAGTGCTGGAAGG9021.5246015246015245No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC8471.4316380170038707No Hit
GGAAGTAAAAGTCGTAACAAGGGTGGCGTTGATGAAGGAGGGGTACGATA6951.1747206869158089No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC6931.1713401957304395No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT5290.8941399185301624No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC3800.6422933252201545No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC3240.547639572029816No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC3190.5391883440663928No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC2840.4800297483224312No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC1910.32283690820276184No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1870.31607592583202343No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA1840.3110051890539695No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC1710.2890319963490695No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGAAGGATC1390.23494413738316178No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1270.21466119027094638No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC1250.21128069908557712No Hit
GGAAGTAAAAGTCGTAACAAGGGGGAAAAAAGAGGCTTTGAAAGAGTGAG1160.19606848875141558No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCAAGATCGACGAGGACTATACCAA1160.19606848875141558No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAGCCGCAGTGGAATCCGTCGTGCG1060.17916603282456942No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1030.17409529604651555No Hit
GGAAGTAAAAGTCGTAACAAGGGCAAGGAGCGCCTCGAGGTAGTGACGAC940.158883085712354No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA900.15212210334161555No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC890.15043185774893092No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAAGACAATTAGCACTTGAC880.14874161215624632No Hit
GGAAGTAAAAGTCGTAACAAGGCGATAGAAGCATGGATGTTAACGCGTAG850.14367087537819245No Hit
GGAAGTAAAAGTCGTAACAAGGCCATCGCCATGGAAGGATTAAAAAACAA830.14029038419282322No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC830.14029038419282322No Hit
GGAAGTAAAAGTCGTAACAAGGTATCTGTAGGTGAACCTGCAGATGGATC770.13014891063671552No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGAAGGATC640.10817571793181549No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC630.10648547233913087No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)