FastQCFastQC Report
Tue 7 May 2024
EGAF00007832390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63592
Total Bases15 Mbp
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2082732.75097496540445No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1603925.22172600327085No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG44767.038621210215121No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT37845.950434016857466No Hit
GCTGCGTTCTTCATCGATGCGATAAAGATTGGCATCATGTTTAATGGGTG30564.8056359290476784No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT10811.6998993584098627No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT9681.5222040508240031No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG5950.9356522833060762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG5430.8538809913196629No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT5300.8334381683230595No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4940.7768272738709271No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4470.7029186061139766No Hit
GCTGCGTTCTTCATCGATGCGCAGGACTGTGCTGAAGATAATATACGAAC3980.6258648886652409No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3870.6085671153604226No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2930.4607497798465216No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2430.3821235375518933No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA2220.34910051578814943No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2080.3270851679456535No Hit
GCTGCGTTCTTCATCGATGCCGAACAGTGTTAAATCCTTACCCGTGTAGT1790.2814819474147692No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCATGTTTAATGGGTG1500.23587872688388475No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1300.20442822996603344No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCGTTGTTAAGAGTCG1230.1934205560447855No Hit
GCTGCGTTCTTCATCGATGCACCCTCCTAGAGGCTGCGTTCTTCATCGAT1190.18713045666121525No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1110.17455025789407472No Hit
GCTGCGTTCTTCATCGATGCGCCCTGACCACCCAGACTCCGTGGTCACCC1110.17455025789407472No Hit
GCTGCGTTCTTCATCGATGCCACCCTCCTAGAGGCTGCGTTCTTCATCGA1070.16826015851050447No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1050.16511510881871935No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTGTCTATACTCCCCCC1040.16354258397282675No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1030.1619700591269342No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1030.1619700591269342No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT970.15253491005157882No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT930.14624481066800857No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT920.14467228582211597No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT880.13838218643854572No Hit
GCTGCGTTCTTCATCGATGAGGACGACCTTATCGAGGTCCTCCCCGTCGA820.12894703736319035No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC810.12737451251729778No Hit
GCTGCGTTCTTCATCGATGCCGAATACTGACGGCGCAGACAGGACACCCA760.11951188828783495No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCTAGAGTCG760.11951188828783495No Hit
GCTGCGTTCTTCATCGATTCCGGAACCAAGAGATCCATTGTTGAAAGTTT750.11793936344194238No Hit
GCTGCGTTCTTCATCGATGCGCCCATCGACTTCGCATCGAGGACGAGCAG750.11793936344194238No Hit
GCTGCGTTCTTCATCGATGCACCCTCCTAGACGCTGCGTTCTTCATCGAT740.11636683859604982No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG740.11636683859604982No Hit
GCTGCGTTCTTCATCGATGCCACCCTCCTAGAGGCTGCGTTCTTCATCGG730.11479431375015724No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTGTGGCTCATTCGTCCCGATGC670.10535916467480186No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT650.10221411498301672No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)