FastQCFastQC Report
Sun 21 May 2023
EGAF00007832391

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832391
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106310
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4452541.88223121061048No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1757216.52901890697018No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC66766.279747907064246No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG63295.95334399397987No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT24782.3309190104411623No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG23332.194525444454896No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC21292.002633806791459No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG19861.8681215313705202No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA18681.7571253880161792No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC11071.0412943279089455No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC9680.9105446336186623No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA8100.761922678957765No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT7430.6988994450192831No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA7210.6782052488006772No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT7200.6772646035180133No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG6880.6471639544727683No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC5860.5512181356410498No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC5740.5399303922490829No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA5060.47596651302793713No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC4150.3903677923055216No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC3980.3743768225002352No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCGAT3790.3565045621296209No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT3730.3508606904336375No Hit
GGAAGTAAAAGTCGTAACAAGCCACAGAAGAAATGAACGATCGTAGGGAT3630.34145423760699845No Hit
GGAAGTAAAAGTCGTAACAAGGGTGGCAAGTGAGGGAGGATGAGAAGTGC3100.29160003762581127No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2710.2549148716019189No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA2520.23704261123130466No Hit
GGAAGTAAAAGTCGTAACAAGGCTTGATGCCTGGAAGTGGGGGCGAAGAA2140.20129809049007621No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA1990.1871884112501176No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC1960.18436647540212583No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGGGGTAGTTTTGGGAAAGGCTATTG1880.1768413131408146No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAAGGAATTCAGAAGAGCCAGGGTG1720.16179098861819208No Hit
GGAAGTAAAAGTCGTAACAAGGTGGGTAAGGAGCTCCTGGACGCGCTCCC1680.15802840748753647No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1620.152384535791553No Hit
GGAAGTAAAAGTCGTAACAAGGTGACTGTTGAGTGAATTTCTTATACAAA1570.14768130937823348No Hit
GGAAGTAAAAGTCGTAACAAGGATGGAAAGAGGTGGGGGAGGAGAAGAGG1360.1279277584422914No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACGACATAAACTACTTGAGTACTAA1340.1260464678769636No Hit
GGAAGTAAAAGTCGTAACAAGAGATGGAGATTAGTCAATATTATCGAAAG1290.12134324146364406No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC1280.12040259618098016No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGAAGCATGTCTACAAGGTTGCATT1280.12040259618098016No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTAGCATAGAGATTAAGAGAGTAACC1200.1128774339196689No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCTCCTCATG1120.10535227165835764No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCCTCTCCGGAGTCCGGTCCCGTTCG1120.10535227165835764No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA1110.10441162637569372No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCGTCCTCATG1090.10253033581036591No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGATCTGGGCGAGTTCCCAGGAGGC1070.10064904524503811No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)