FastQCFastQC Report
Sun 21 May 2023
EGAF00007832392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106310
Sequences flagged as poor quality0
Sequence length236-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1708516.07092465431286No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1446013.601730787320102No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG94598.8975637287179No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT63475.97027560906782No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG62785.905371084564011No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT61645.798137522340325No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT34023.200075251622613No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG27132.551970651867181No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG25132.3638415953343994No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC24332.2885899727212866No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG23102.1728906029536263No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG19121.798513780453391No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA19101.7966324898880632No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC18961.7834634559307685No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT13511.2708117768789389No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT10921.027184648668987No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT9730.915247860031982No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG9570.9001975355093594No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGACGCTGCGTTCTTCATCGA9090.8550465619414919No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA8040.7562788072617816No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG6020.5662684601636723No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG6010.5653278148810084No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT5830.548396199793058No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAGGCTGCGTTCTTCATCGA5710.5371084564010912No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGACGCTGCGTTCTTCATCGAT5410.5088890979211739No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT5160.48537296585457623No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA5000.47032264133195373No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4600.4326968300253974No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGATGCTGCGTTCTTCATCGA4150.3903677923055216No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3760.3536826262816292No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT3330.3132348791270812No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAAGCTGCGTTCTTCATCGA3180.29912519988712255No Hit
GCTGCGTTCTTCATCGATGCACTGGGGAGCCCCTGCTTCAAACCTGCAGG3080.2897187470604835No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2670.2511522904712633No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGAGGCTGCGTTCTTCATCGAT2600.24456777349261594No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA2540.2389239017966325No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTAATGTCTTC2490.23422067538331295No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2400.2257548678393378No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGTTT2230.20976389803405135No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG2160.203179381055404No Hit
GCTGCGTTCTTCATCGATGCCCCTAGATTCTTCCAAGAGGATTGGAGGTG2150.20223873577274012No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGATGCTGCGTTCTTCATCGAT2020.19001034709810932No Hit
GCTGCGTTCTTCATCGATGTCGGAACCAAGAGATCCGTTGTTGAAAGTTT1920.18060389427147022No Hit
GCTGCGTTCTTCATCGATGAAACTGCCTTTAAAAATTATGACAATAAGAG1750.1646129244661838No Hit
GCTGCGTTCTTCATCGATGCCAAGCCCCAGCCTTTCATGGGCCCTGGACT1590.14956259994356128No Hit
GCTGCGTTCTTCATCGACGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1580.1486219546608974No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGTTT1560.14674066409556955No Hit
GCTGCGTTCTTCATCGATGCCCAAACCAAGAGATCCGTTGTTGAAAGTTT1540.14485937353024175No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1460.13733421126893047No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGAAGCTGCGTTCTTCATCGAT1450.13639356598626656No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1420.13357163013827486No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1420.13357163013827486No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1400.13169033957294704No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1390.13074969429028313No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1380.12980904900761922No Hit
GCTGCGTTCTTCATCGATGCCGGTGAATTATGCGATGGTGGTGGCGGCGG1360.1279277584422914No Hit
GCTGCGTTCTTCATCGATGCACATGACTAAGCCTTGCTGTGGGAAAGGAT1310.12322453202897186No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCACCTGTCCGAGGT1280.12040259618098016No Hit
GCTGCGTTCTTCATCGATGCCCGTGGTGATGGTTACGGTTACATTCACCG1240.11664001505032452No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA1240.11664001505032452No Hit
GCTGCGTTCTTCATCAACGCATGAGGACGCTGCGTTCTTCATCAACGCAT1130.10629291694102154No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)