FastQCFastQC Report
Sun 21 May 2023
EGAF00007832393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63080
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2613241.42675967025999No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCG1747627.70450221940393No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC15012.3795180722891565No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA13102.076727964489537No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACTGAATCCGAAAAGAGCACA11541.8294229549778058No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC10781.7089410272669625No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC10591.678820545339252No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG10051.5932149651236527No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC9251.4663918833227647No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC8001.2682308180088777No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC6801.077996195307546No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5390.8544705136334813No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA4800.7609384908053266No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA3990.6325301204819277No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC3970.6293595434369056No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC3920.6214331008243501No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC3870.6135066582117945No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC3220.5104629042485732No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA1800.2853519340519975No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1770.28059606848446417No Hit
GGAAGTAAAAGTCGTAACAAGGGAGTGAAAGCTGGCAGTGAAGAGGAAGG1700.2694990488268865No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1650.261572606214331No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCG1500.23779327837666456No Hit
GGAAGTAAAAGTCGTAACAAGGCTGCGCTCTGTAACATTACTCTGACGGA1440.22828154724159797No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAAACCTCTCCGGCG1260.19974635383639824No Hit
GGAAGTAAAAGTCGTAACAAGGTCAGTCGTACCGTAACTTCCGACAACCA1240.19657577679137603No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT1120.17755231452124287No Hit
GGAAGTAAAAGTCGTAACAAGGATACTAAGGCACAGCTGATTGATGTCAC930.14743183259353201No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC920.14584654407102093No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAGACCTCTCCGGCG870.13792010145846545No Hit
GGAAGTAAAAGTCGTAACAAGGATACCCGTGTTGGCAACATGGCGCTCGT860.13633481293595434No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCGACGTGCTTCAGGACTGCCTA840.13316423589093215No Hit
GGAAGTAAAAGTCGTAACAAGACTGCGCTCTGTAACGTTACTCTGACGGA770.12206721623335447No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTAAACTGAATCCGAAAAGAGCACA720.11414077362079898No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT720.11414077362079898No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC680.1077996195307546No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAG670.1062143310082435No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)