FastQCFastQC Report
Sun 21 May 2023
EGAF00007832428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61150
Sequences flagged as poor quality0
Sequence length235-238
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2874947.013900245298444No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT58449.556827473426003No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG20663.3785772690106297No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGA16142.639411283728536No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGA15862.5936222403924774No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT10931.7874080130825836No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGA9601.5699100572363043No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGA8141.331152902698283No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT7441.2166802943581358No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7431.2150449713818479No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGG6751.1038430089942763No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTGCGAT6391.044971381847915No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC5350.874897792313982No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC5140.8405560098119378No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGG4960.8111201962387571No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT4390.7179067865903517No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCC4290.7015535568274734No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGG3580.5854456255110384No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCGG3520.5756336876533115No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3300.5396565821749796No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC3160.5167620605069501No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAAGTCA3010.4922322158626329No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2860.4677023712183156No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT2660.4349959116925593No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGGGCTGCGTTCTTCATCGAT2260.3695829926410466No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1990.32542927228127555No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1980.3237939493049877No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1960.3205233033524121No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1880.30744071954210955No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGCGCTGCGTTCTTCATCGAT1760.28781684382665573No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGGGCTGCGTTCTTCATCGAT1670.27309893704006544No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG1570.2567457072771872No Hit
GCTGCGTTCTTCATCGATGCTGTCCGCGTAATCGTAGATTGTCTTATGAC1520.24856909239574818No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1510.24693376941946035No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCTG1490.2436631234668847No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCTG1420.23221586263286997No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1330.21749795584627965No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1290.21095666394112836No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT1250.2044153720359771No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGCGCTGCGTTCTTCATCGAT1230.20114472608340145No Hit
GCTGCGTTCTTCATCGAACCAACCTTGGGGCTGCGTTCTTCATCGAACCA1220.19950940310711368No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1160.18969746524938677No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCTG1040.17007358953393295No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGTGCTGCGTTCTTCATCGAT1030.16843826655764513No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1010.1651676206050695No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1000.1635322976287817No Hit
GCTGCGTTCTTCATCGAACCAACCTTGGCGCTGCGTTCTTCATCGAACCA990.16189697465249386No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA930.15208503679476698No Hit
GCTGCGTTCTTCATCGATTCGAGAACCAAGAGATCCGTTGTTGAAAGTTT920.15044971381847916No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG910.14881439084219134No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC860.14063777596075225No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCACCTGTCCGAGGT840.13736713000817663No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGTGCTGCGTTCTTCATCGAT830.1357318070318888No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC770.1259198691741619No Hit
GCTGCGTTCTTCATCGATGCGATAACCAAGAGATCCGTTGTTGAAAGTTT730.11937857726901063No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGAGCTGCGTTCTTCATCGAT690.11283728536385937No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGAGCTGCGTTCTTCATCTG680.11120196238757155No Hit
GCTGCGTTCTTCATCGATGCGACGTAACACAAGGTCGATACCTTTTTCTC660.10793131643499591No Hit
GCTGCGTTCTTCATCGATGCACCAACCTTGGGGCTGCGTTCTTCATCGGC660.10793131643499591No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT640.10466067048242028No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA630.10302534750613246No Hit
GCTGCGTTCTTCATCGATGAACCAACCTTGGAGCTGCGTTCTTCATCGAT630.10302534750613246No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGAT620.10139002452984464No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)