FastQCFastQC Report
Sun 21 May 2023
EGAF00007832442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96861
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3173132.7593148945396No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1519615.688460784010077No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1228112.678993609399036No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG95479.856392149575164No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCAAGGCATCCACCGTATGCCCTT25782.6615459266371397No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT24142.4922311353382685No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG18641.924407140128638No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG14731.5207358998977916No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT9490.9797544935526167No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT8930.921939686767636No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7400.7639813753729572No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG7170.7402360083005544No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT6860.7082313831160116No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT6400.6607406489712061No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGTTG5650.5833101041698929No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT5430.5605971443615078No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA5260.5430462208732101No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT4270.44083790173547666No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4090.4222545709831615No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT3180.3283055099575681No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT3060.31591662278935795No Hit
GCTGCGTTCTTCATCGATGCCAGCTCGCTTACAGTTACAAATTCGGTAAG3060.31591662278935795No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2900.2993981065650778No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG2570.26532866685249995No Hit
CCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT2160.22299996902778207No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA2080.214740710915642No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT1910.19718978742734433No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1900.19615738016332684No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTA1770.1827360857310992No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT1580.16312034771476652No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1560.1610555331867315No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG1530.15795831139467897No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1460.1507314605465564No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGTACGATCGGGCAAACT1390.14350460969843384No Hit
GCTGCGTTCTTCATCGATGCCTTGTAAGAATTCAGTTAGTTGACTTTTTG1310.13524535158629378No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1280.13214812979424123No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1280.13214812979424123No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGACGATCGGGCAAACT1270.13111572253022372No Hit
CCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1210.12492127894611867No Hit
GCTGCGTTCTTCATCGATAGCCATGCCGAGGGATCCAACGCTACCAGTTG1200.12388887168210115No Hit
GCTGCGTTCTTCATCGATGCTGTGCTTAACAGCAAAGTGGAGAATAAGGA1150.1187268353620136No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1150.1187268353620136No Hit
GCTGCGTTCTTCATCGATGTGAGAACCAAGAGATCCGTTGTTGAAAGTTT1120.11562961356996108No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGTTT1110.11459720630594356No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1020.10530554092978597No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1000.10324072640175096No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGTTG980.10117591187371595No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT980.10117591187371595No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)