FastQCFastQC Report
Sun 21 May 2023
EGAF00007832448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81164
Sequences flagged as poor quality0
Sequence length237-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1898023.384751860430733No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAT1385117.06544773544921No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1288715.877729042432605No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG44335.461781085210192No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGC28113.4633581390764374No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG21052.593514365975063No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT17192.1179340594352176No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGATG17182.1167019861022127No Hit
GCTGCGTTCTTCATCGATGCAGTCCATGATATTAGCCACTACCATACATA10651.3121580996500912No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG7730.9523926864126953No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG6040.7441722931348873No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG5700.7022817998127249No Hit
GCTGCGTTCTTCATCGATGCTTGGAAATAGGTTGCTGAACGAACGACTTT5580.6874969198166675No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5470.6739441131536149No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT4840.5963234931743137No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4720.5815386131782564No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4540.5593612931841703No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA4510.555665073185156No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT4100.50515006653196No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGGCT3480.4287615198856636No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT3120.3844068798974915No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG3110.3831748065644867No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA3090.3807106598984772No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2770.34128431324232417No Hit
GCTGCGTTCTTCATCGATGCACAATGCAAAATCATCACAACGTGCGCTCA2750.33882016657631464No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCCTT2690.33142772657828595No Hit
GCTGCGTTCTTCATCGATGCCGGAGACGGGTTCGTTACGACGTGGTGGGC2550.314178699916219No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2430.2993938199201616No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT2430.2993938199201616No Hit
GCTGCGTTCTTCATCGATGCGGTACCGACTTCGAAGACTTGCAGGATGGC2410.2969296732541521No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2400.2956975999211473No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2290.2821447932580947No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC2280.2809127199250899No Hit
GCTGCGTTCTTCATCGATGCCGAACAGTGTTAAATCCTTACCCGTGTAGT2060.25380710659898476No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1990.2451825932679513No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT1880.23162978660489875No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGGGAGTCG1870.23039771327189396No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1840.2267014932728796No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTTT1820.22423734660687003No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1740.2143807599428318No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1720.2119166132768222No Hit
GCTGCGTTCTTCATCGATGCACCTTTCAATCTTAAATACTACAAAAAGGG1710.21068453994381744No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTGC1600.1971317332807649No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1530.1885072199497314No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1410.17372233995367406No Hit
GCTGCGTTCTTCATCGATGCCTTTCGCCGACAAACAGCTAACGTAGATAT1290.15893745995761668No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT1190.1466167266275689No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT1190.1466167266275689No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGCC1140.14045635996254496No Hit
GCTGCGTTCTTCATCGCTGGTCAGACGAGCTGCGTTCTTCATCGCTGGTC1120.1379922132965354No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1090.13429599329752107No Hit
GCTGCGTTCTTCATCGATGCGGTCAGACGAGCTGCGTTCTTCATCGATGC1060.13059977329850672No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1000.12320733330047805No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT990.12197525996747326No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG970.1195111133014637No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT920.1133507466364398No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGTC900.11088659997043022No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT880.10842245330442069No Hit
GCTGCGTTCTTCATCGATGCTGCCAGACAAATATGCTCTGTGGCAATGGC840.10349415997240156No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT820.101030013306392No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)