FastQCFastQC Report
Sun 21 May 2023
EGAF00007832459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100395
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3485534.717864435479854No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3483234.694954928034264No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC26002.5897704068927734No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC22322.2232182877633346No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC19751.9672294436973954No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC16201.6136261766024205No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG15831.5767717515812538No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT8740.870561282932417No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG8310.827730464664575No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC7860.7829075153145078No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA7360.7331042382588774No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG7260.7231435828477514No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA7170.7141789929777379No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC6800.6773245679565715No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC6490.6464465361820808No Hit
GGAAGTAAAAGTCGTAACATGAGTGCAGGCTTCCAGGAACTGGCAACAGG6060.6036157179142387No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC5310.5289108023307934No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC5250.5229344090841177No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC4440.44225310025399667No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA3850.38348523332835305No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCG3580.35659146371831263No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC3230.3217291697793715No Hit
GGAAGTAAAAGTCGTAACAAGGCTTTTGGTGTCCGTGATGGACTGAATCT3130.31176851436824543No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG2680.2669455650181782No Hit
GGAAGTAAAAGTCGTAACAAGTCCACAGGATTTAGTATCTATGGTAGTTG2590.25798097514816476No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA2490.24802031973703867No Hit
GGAAGTAAAAGTCGTAACAACAGCAACGGTTTCAGTCCATATAGGACGCA2390.23805966432591266No Hit
GGAAGTAAAAGTCGTAACAAGGCTACGGAAAAGAAGGTTTTGGTGGGCAA2380.23706359878480002No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC2030.20220130484585888No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGTGTTCGAGGAGTTGGGGCAGGGCG1950.194232780516958No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGGCAACGTGCTTCAGGACTGCCTA1780.17729966631804372No Hit
GGAAGTAAAAGTCGTAACAAGGCACTGAAGGGGAAGGGAGGGAAGACGAT1760.17530753523581852No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1550.15439015887245383No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT1520.15140196224911598No Hit
GGAAGTAAAAGTCGTAACAAGGAAATTAAGCTCAAAGATACATCTGAATT1460.14542556900244036No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG1340.1334727825090891No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA1320.13148065142686388No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1250.12450819263907566No Hit
GGAAGTAAAAGTCGTAACAAGGAAGTCACCCCCACAACCGTGAGTGATGA1180.1175357338512874No Hit
GGAAGTAAAAGTCGTAACAAGGGGAAGCAGATCGGCATCGTGACGGGAAT1160.11554360276906221No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA1130.1125554061457244No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)